Limnephilus marmoratus (Caddisflies, reference) (iiLimMarm1.1)

Limnephilus marmoratus (Caddisflies, reference) Assembly and Gene Annotation

About Limnephilus marmoratus

Limnephilus is a genus of caddisflies in the family Limnephilidae. There are over 180 species of Limnephilus, described between 1824 and 1999.

This genus is most important in lakes, spring ponds, and beaver ponds. Some of its species do well enough in spring creeks and slow pools to be important to trout there. Some Limnephilus species are multibrooded. It is fairly frequent in Leicestershire and Rutland, and common and widespread over much of Britain.

Limnephilus marmoratus is a member of the Limnephilidae family of caddisflies with about 100 genera. They belong to the main lineage of case-constructing caddisflies, the Integripalpia or tube-case caddisflies. The Limnephilidae is one of the most species-rich Trichoptera families of northern temperate regions, but only a few are known from tropical areas and the Southern Hemisphere. For this reason they are often known as northern caddisflies.

Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source)

Taxonomy ID 1271730

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_917880885.1].

The total length of the assembly is 1,629,971,709 bp contained within 68 scaffolds. The scaffold N50 value is 56174236, the scaffold L50 value is 13. Assembly gaps span 118500 bp. The GC% content of the assembly is 36.0%.

Annotation

Protein-coding genes are automatically annotated using Ensembl's genebuild pipeline.

All transcripts are based on mRNA and proteins in public scientific databases. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyiiLimMarm1.1, INSDC Assembly GCA_917880885.1, Nov 2021
Database version113.1
Golden Path Length1,629,956,307
Genebuild byEnsembl
Genebuild methodAnno
Data sourceWELLCOME SANGER INSTITUTE

Gene counts

Coding genes13,354
Non coding genes3,108
Small non coding genes1,342
Long non coding genes1,763
Misc non coding genes3
Gene transcripts22,969