Penaeus japonicus (Kuruma shrimp, Ginoza2017) (Mj_TUMSAT_v1.0)

Penaeus japonicus (Kuruma shrimp, Ginoza2017) Assembly and Gene Annotation

About Penaeus japonicus

Marsupenaeus is a monotypic genus of prawn. It contains a single species, Marsupenaeus japonicus, known as the kuruma shrimp, kuruma prawn, or Japanese tiger prawn. It occurs naturally in bays and seas of the Indo-West Pacific, but has also reached the Mediterranean Sea as a Lessepsian migrant. It is one of the largest species of prawns, and is accordingly one of the most economically important species in the family.

Picture credit: Creative Commons Zero Public Domain Dedication via Wikimedia Commons (Image source)

Taxonomy ID 27405

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_017312705.1].

The total length of the assembly is 1705010925 bp contained within 18211 scaffolds. The scaffold N50 value is 234949, the scaffold L50 value is 2083. Assembly gaps span 35891331 bp.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyMj_TUMSAT_v1.0, INSDC Assembly GCA_017312705.1,
Database version113.1
Golden Path Length1,705,010,925
Genebuild byNCBI
Genebuild methodImport
Data sourceLaboratory of Genome Science Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology

Gene counts

Coding genes22,301
Non coding genes3,444
Small non coding genes2,183
Long non coding genes1,261
Pseudogenes410
Gene transcripts43,805