Penaeus japonicus (Kuruma shrimp, Ginoza2017) Assembly and Gene Annotation
About Penaeus japonicus
Marsupenaeus is a monotypic genus of prawn. It contains a single species, Marsupenaeus japonicus, known as the kuruma shrimp, kuruma prawn, or Japanese tiger prawn. It occurs naturally in bays and seas of the Indo-West Pacific, but has also reached the Mediterranean Sea as a Lessepsian migrant. It is one of the largest species of prawns, and is accordingly one of the most economically important species in the family.
Picture credit: Creative Commons Zero Public Domain Dedication via Wikimedia Commons (Image source)
Taxonomy ID 27405
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_017312705.1].
The total length of the assembly is 1705010925 bp contained within 18211 scaffolds. The scaffold N50 value is 234949, the scaffold L50 value is 2083. Assembly gaps span 35891331 bp.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Mj_TUMSAT_v1.0, INSDC Assembly GCA_017312705.1, |
Database version | 113.1 |
Golden Path Length | 1,705,010,925 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Laboratory of Genome Science Graduate School of Marine Science and Technology, Tokyo University of Marine Science and Technology |
Gene counts
Coding genes | 22,301 |
Non coding genes | 3,444 |
Small non coding genes | 2,183 |
Long non coding genes | 1,261 |
Pseudogenes | 410 |
Gene transcripts | 43,805 |