Penaeus monodon (Black tiger shrimp, SGIC_2016) (NSTDA_Pmon_1)

Penaeus monodon (Black tiger shrimp, SGIC_2016) Assembly and Gene Annotation

About Penaeus monodon

Penaeus monodon, commonly known as the giant tiger prawn, Asian tiger shrimp, black tiger shrimp (Penaeus monodon), and other names, is a marine crustacean that is widely reared for food.

Picture credit: Creative Commons Attribution 3.0 via Wikimedia Commons (Image source)

Taxonomy ID 6687

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_015228065.1].

The total length of the assembly is 2394347767 bp contained within 26876 scaffolds. The scaffold N50 value is 44862054, the scaffold L50 value is 23. Assembly gaps span 393564173 bp. The GC% content of the assembly is 0.0%.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyNSTDA_Pmon_1, INSDC Assembly GCA_015228065.1,
Database version111.1
Golden Path Length2,394,347,767
Genebuild byNCBI
Genebuild methodImport
Data sourceSAFE-Aqua

Gene counts

Coding genes24,092
Non coding genes4,281
Small non coding genes2,497
Long non coding genes1,784
Pseudogenes3,169
Gene transcripts40,963