Penaeus vannamei (Pacific white shrimp) (ASM378908v1)

Penaeus vannamei (Pacific white shrimp) Assembly and Gene Annotation

About Penaeus vannamei

Whiteleg shrimp, also known as Pacific white shrimp (Penaeus vannamei) or King prawn, is a species of prawn of the eastern Pacific Ocean commonly caught or farmed for food.

Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source)

Taxonomy ID 6689

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_003789085.1].

The total length of the assembly is 1663581301 bp contained within 4683 scaffolds. The scaffold N50 value is 605555, the scaffold L50 value is 892. Assembly gaps span 45527693 bp. The GC% content of the assembly is 36.5%.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyASM378908v1, INSDC Assembly GCA_003789085.1,
Database version111.1
Golden Path Length1,663,581,301
Genebuild byNCBI
Genebuild methodImport
Data sourceInstitute of Oceanology, Chinese Academy of Sciences

Gene counts

Coding genes24,987
Non coding genes4,374
Small non coding genes2,583
Long non coding genes1,791
Pseudogenes1,409
Gene transcripts39,654