Phlebotomus papatasi (Sand fly, M1) Assembly and Gene Annotation
About Phlebotomus papatasi
Phlebotomus papatasi is a species of insects commonly known as sandflies. Due to their ectothermic climate limitations, P. papatasi are confined to regions with temperatures above sixty degrees Fahrenheit for at least three months of the year, spanning over much of the European Mediterranean, North Africa, the Middle East, and Central Asia. Around one thousand sandfly species have been described, belonging to the subfamily Phlebotominae within the family Psychodidae. The Psychodidae family belongs to the order Diptera within the class Insecta of the subphylum Hexapoda of the Arthropod phylum.
Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 29031
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_024763615.1].
The total length of the assembly is 351607531 bp contained within 645 scaffolds. The scaffold N50 value is 111783093, the scaffold L50 value is 2. The GC% content of the assembly is 34.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_024763615.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release vGCF_024763615.1-RS_2023_05.html. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Ppap_2.0, INSDC Assembly GCA_024763615.2, |
Database version | 113.1 |
Golden Path Length | 351,623,088 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Baylor College of Medicine |
Gene counts
Coding genes | 11,610 |
Non coding genes | 995 |
Small non coding genes | 446 |
Long non coding genes | 549 |
Pseudogenes | 58 |
Gene transcripts | 21,975 |