Rhipicephalus sanguineus (Brown dog tick, Rsan-2018) Assembly and Gene Annotation
About Rhipicephalus sanguineus
Rhipicephalus sanguineus, commonly called the brown dog tick (Rhipicephalus sanguineus), kennel tick, or pantropical dog tick, is a species of tick found worldwide, but more commonly in warmer climates. This species is unusual among ticks in that its entire lifecycle can be completed indoors. The brown dog tick is easily recognized by its reddish-brown color, elongated body shape, and hexagonal basis capituli. Adults are 2.28 to 3.18 mm in length and 1.11 to 1.68 mm in width. They do not have ornamentation on their backs.
Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 34632
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_013339695.2].
The total length of the assembly is 2365502231 bp contained within 2327 scaffolds. The scaffold N50 value is 208696187, the scaffold L50 value is 5. Assembly gaps span 2707176 bp. The GC% content of the assembly is 47.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_013339695.2.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | BIME_Rsan_1.4, INSDC Assembly GCA_013339695.2, |
Database version | 113.1 |
Golden Path Length | 2,365,502,231 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | TIGMIC Group, Beijing Institute of Microbiology and Epidemiology |
Gene counts
Coding genes | 22,510 |
Non coding genes | 8,945 |
Small non coding genes | 5,134 |
Long non coding genes | 3,770 |
Misc non coding genes | 41 |
Pseudogenes | 1,253 |
Gene transcripts | 42,803 |