Rhipicephalus sanguineus (Brown dog tick, Rsan-2018) (BIME_Rsan_1.4)

Rhipicephalus sanguineus (Brown dog tick, Rsan-2018) Assembly and Gene Annotation

About Rhipicephalus sanguineus

Rhipicephalus sanguineus, commonly called the brown dog tick (Rhipicephalus sanguineus), kennel tick, or pantropical dog tick, is a species of tick found worldwide, but more commonly in warmer climates. This species is unusual among ticks in that its entire lifecycle can be completed indoors. The brown dog tick is easily recognized by its reddish-brown color, elongated body shape, and hexagonal basis capituli. Adults are 2.28 to 3.18 mm in length and 1.11 to 1.68 mm in width. They do not have ornamentation on their backs.

Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 34632

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_013339695.2].

The total length of the assembly is 2365502231 bp contained within 2327 scaffolds. The scaffold N50 value is 208696187, the scaffold L50 value is 5. Assembly gaps span 2707176 bp. The GC% content of the assembly is 47.0%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_013339695.2.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyBIME_Rsan_1.4, INSDC Assembly GCA_013339695.2,
Database version113.1
Golden Path Length2,365,502,231
Genebuild byNCBI
Genebuild methodImport
Data sourceTIGMIC Group, Beijing Institute of Microbiology and Epidemiology

Gene counts

Coding genes22,510
Non coding genes8,945
Small non coding genes5,134
Long non coding genes3,770
Misc non coding genes41
Pseudogenes1,253
Gene transcripts42,803