Sitophilus oryzae (Rice weevil) Assembly and Gene Annotation
About Sitophilus oryzae
The rice weevil (Sitophilus oryzae) is a stored product pest which attacks seeds of several crops, including wheat, rice, and maize. The adults are usually between 3 and 4.6 mm long, with a long snout.
Female S. oryzae use strong mandibles to chew a hole into a grain kernel after which she deposits a single egg within the hole, sealing it with secretions from her ovipositor. The larva develops within the grain, hollowing it out while feeding. It then pupates within the grain kernel and emerges 2–4 days after eclosion.
Picture credit: Creative Commons Attribution-Share Alike 2.5 via Wikimedia Commons (Image source)
Taxonomy ID 7048
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_002938485.1].
The total length of the assembly is 770567808 bp contained within 2025 scaffolds. The scaffold N50 value is 2860826, the scaffold L50 value is 73. Assembly gaps span 12640934 bp. The GC% content of the assembly is 32.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_002938485.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Soryzae_2.0, INSDC Assembly GCA_002938485.2, |
Database version | 113.1 |
Golden Path Length | 770,567,808 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | BF2I (Biologie Fonctionnelle Insectes et Interactions) Laboratory |
Gene counts
Coding genes | 15,057 |
Non coding genes | 2,541 |
Small non coding genes | 387 |
Long non coding genes | 2,154 |
Pseudogenes | 359 |
Gene transcripts | 27,309 |