Varroa jacobsoni (Varroa mite, VJ856) (vjacob_1.0)

Varroa jacobsoni (Varroa mite, VJ856) Assembly and Gene Annotation

About Varroa jacobsoni

Varroa jacobsoni is a species of mite that parasitises Apis cerana. The more damaging Varroa destructor was previously included under the name V. jacobsoni, but the two species can be separated on the basis of the DNA (Varroa jacobsoni) sequence of the cytochrome oxidase I gene in the mitochondrial DNA.

Picture credit: Creative Commons Attribution 3.0 au via Wikimedia Commons (Image source) Taxonomy ID 62625

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_002532875.1].

The total length of the assembly is 365585945 bp contained within 4881 scaffolds. The scaffold N50 value is 233810, the scaffold L50 value is 482. Assembly gaps span 408908 bp. The GC% content of the assembly is 41.0%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_002532875.1.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

Assemblyvjacob_1.0, INSDC Assembly GCA_002532875.1,
Database version113.1
Golden Path Length365,585,945
Genebuild byNCBI
Genebuild methodImport
Data sourceOkinawa Institute of Science and Technology

Gene counts

Coding genes10,739
Non coding genes4,659
Small non coding genes326
Long non coding genes4,333
Pseudogenes88
Gene transcripts35,746