Wyeomyia smithii (Pitcher plant Mosquito, HCP4-BCI-WySm-NY-G18) Assembly and Gene Annotation
About Wyeomyia smithii
Wyeomyia smithii, the pitcher plant mosquito, is an inquiline mosquito that completes its pre-adult life cycle in the phytotelma of—that is, the water contained by—the purple pitcher plant, Sarracenia purpurea. In this microcommunity of bacteria, rotifers, protozoa, and midges, W. smithii is the top-level predator; its presence determines the bacterial species diversity within the pitcher.
Picture credit: Creative Commons Attribution 4.0 via Wikimedia Commons (Image source) Taxonomy ID 174621
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_029784165.1].
The total length of the assembly is 769230131 bp contained within 266 scaffolds. The scaffold N50 value is 278041626, the scaffold L50 value is 2. The GC% content of the assembly is 39.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_029784165.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release vGCF_029784165.1-RS_2023_04.html. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | ASM2978416v1, INSDC Assembly GCA_029784165.1, |
Database version | 113.1 |
Golden Path Length | 769,230,131 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Rockefeller University |
Gene counts
Coding genes | 15,029 |
Non coding genes | 2,099 |
Small non coding genes | 615 |
Long non coding genes | 1,484 |
Pseudogenes | 440 |
Gene transcripts | 33,334 |