
Contarinia nasturtii (Swede midge, CC-2019) Assembly and Gene Annotation
About Contarinia nasturtii
Contarinia nasturtii, the swede midge (Contarinia nasturtii), is a small fly, the larvae of which infest brassica plants, causing twisting and distortion of the leaf stems and foliage including death of the growing point in seedlings, or damage to developing flower heads. It is native to Europe and Turkey, and has been introduced into North America where it is regarded as an invasive species.
Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source) Taxonomy ID 265458
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_009176525.2].
The total length of the assembly is 185885008 bp contained within 5545 scaffolds. The scaffold N50 value is 4652070, the scaffold L50 value is 13. The GC% content of the assembly is 34.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_009176525.2.
Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by metazoa.
Statistics
Summary
Assembly | AAFC_CNas_1.1, INSDC Assembly GCA_009176525.2, |
Database version | 115.1 |
Golden Path Length | 185,885,008 |
Genebuild by | NCBI RefSeq |
Genebuild method | Import |
Data source | Agriculture Canada |
Gene counts
Coding genes | 14,889 |
Non coding genes | 1,128 |
Small non coding genes | 252 |
Long non coding genes | 876 |
Pseudogenes | 104 |
Gene transcripts | 26,856 |