NOTE: The genome sequence and annotation represented here correspond with the original genome publication (Mitreva et al, 2011). For the latest data, including the genomes of other Trichinella species, please visit WormBase ParaSite.

About Trichinella spiralis

Trichinella spiralis is a nematode parasite, occurring in rats, pigs, bears and humans, and is responsible for the disease trichinosis. It is sometimes referred to as the "pork worm" due to it being found commonly in undercooked pork products.

Taxonomy ID 6334

Data source WormBase

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

Other data

Various protein and cDNA sequences have been aligned to the T. spiralis genome and can be viewed on the genome browser:

  • Complete protein sets from human (UniProtKB), D. melanogaster (FlyBase), S. cerevisae (SGD), and selected other nematodes (WormBase)
  • All other reviewed protein sequences from UniProtKB
  • ESTs and mRNAs from other nematodes in WormBase

About this species