Caenorhabditis elegans

Caenorhabditis elegans

Taxonomy ID 6239

About Caenorhabditis elegans

The nematode worm Caenorhabditis elegans has been a major model organism for basic biomedical research for over 30 years. Genetic and molecular research in C.elegans has played a key role in the development of our understanding of many important processes, including cell death, micro RNAs and RNA interference, development and aging. C. elegans was the first animal whose genome was sequenced (C.elegans Genome Sequencing Consortium, 1998), and has been an exemplar in the application of genomic data to functional biology in animals.

C. elegans is a small, free-living nematode found in decaying plant material, especially compost and mushroom beds in temperate regions throughout the world. It feeds on the bacteria and other microorganisms associated with plant decay, and is frequently found associated with snails, slugs, millipedes, mites and pill bugs, which are presumed to transport worms from one location to another. The animal has a short generation time, developing through four larval stages into an adult. C. elegans is hermaphroditic and distinct from the majority of other characterised nematodes which have both male and female adult animals.

More information and statistics

Genome assembly: WBcel235

More information and statistics

Download DNA sequence (FASTA)

Other assemblies

  • WBcel215 (Ensembl Metazoa release 70)
  • WS220 (Ensembl Metazoa release 66)
  • WS210 (Ensembl Metazoa release 60)
  • WS200 (Ensembl Metazoa release 58)
  • WS190 (Ensembl Metazoa release 54)

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins (FASTA)

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analysis

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

Regulation

What can I find? Microarray annotations.

More about the Ensembl Metazoa microarray annotation strategy