Dendroctonus ponderosae (Mountain pine beetle, FM_Combo_2020) (Dpon_F_20191213v2)

Dendroctonus ponderosae (Mountain pine beetle, FM_Combo_2020) Assembly and Gene Annotation

About Dendroctonus ponderosae

The mountain pine beetle (Dendroctonus ponderosae) is a species of bark beetle native to the forests of western North America from Mexico to central British Columbia. It has a hard black exoskeleton, and measures approximately 5 millimetres, about the size of a grain of rice.

Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 77166

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_020466585.2].

The total length of the assembly is 223597517 bp contained within 2112 scaffolds. The scaffold N50 value is 16553750, the scaffold L50 value is 4. The GC% content of the assembly is 36.0%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_020466585.2.

Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by metazoa.

Statistics

Summary

AssemblyDpon_F_20191213v2, INSDC Assembly GCA_020466585.2,
Database version115.1
Golden Path Length223,597,517
Genebuild byNCBI RefSeq
Genebuild methodImport
Data sourceNatural Resources Canada

Gene counts

Coding genes12,777
Non coding genes2,237
Small non coding genes268
Long non coding genes1,957
Misc non coding genes12
Pseudogenes40
Gene transcripts26,203