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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
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Molecular interactions
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ID History
- Gene history

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DB built by FlyBase

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Gene: CG5916 FBgn0038401

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Gene Synonyms

Location

Primary_assembly 3R: 16,147,029-16,149,636 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 2 transcripts (splice variants), 62 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG5916-RB	FBtr0344009	2396	330aa	FBpp0310460	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VEY4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG5916-RA	FBtr0083251	2146	330aa	FBpp0082705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VEY4	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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