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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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Genetic Variation
- Variant table
- Variant image
- Structural variants
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ID History
- Gene history

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DB built by FlyBase

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Gene: CG42694 FBgn0261584

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Location

Primary_assembly 2R: 22,941,877-22,945,147 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 2 transcripts (splice variants), 8 orthologues and 85 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42694-RB	FBtr0334011	2918	512aa	FBpp0306130	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD89 C0PTU2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42694-RA	FBtr0302896	1609	512aa	FBpp0292027	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JD89	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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