
Hydra vulgaris (Swiftwater hydra) Assembly and Gene Annotation
About Hydra vulgaris
Hydra vulgaris, the fresh-water polyp, is a small freshwater hydroid with length from 10 mm to 30 mm and width about 1mm.
H. vulgaris is often used, like many hydra, as a model organism for morphallactic regeneration because they are easy to care for, requiring minimal direct care, and reproduce relatively quickly. It is reported that they do not undergo senescence, making them biologically immortal although this has been disputed.
Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source) Taxonomy ID 6087
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_038396675.1].
The total length of the assembly is 911675201 bp contained within 15 scaffolds. The scaffold N50 value is 61145917, the scaffold L50 value is 7. The GC% content of the assembly is 27.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_038396675.1.
Metazoa displaying genes imported from NCBI RefSeq annotation release GCF_038396675.1-RS_2024_06. Small RNA features, protein features, BLAST hits and cross-references have been computed by metazoa.
Statistics
Summary
Assembly | HydraT2T_AEP, INSDC Assembly GCA_038396675.1, |
Database version | 115.1 |
Golden Path Length | 911,675,201 |
Genebuild by | NCBI RefSeq |
Genebuild method | Import |
Data source | University of Vienna |
Gene counts
Coding genes | 22,837 |
Non coding genes | 5,640 |
Small non coding genes | 800 |
Long non coding genes | 4,762 |
Misc non coding genes | 78 |
Pseudogenes | 491 |
Gene transcripts | 42,326 |