Hydra vulgaris (Swiftwater hydra) (HydraT2T_AEP)

Hydra vulgaris (Swiftwater hydra) Assembly and Gene Annotation

About Hydra vulgaris

Hydra vulgaris, the fresh-water polyp, is a small freshwater hydroid with length from 10 mm to 30 mm and width about 1mm.

H. vulgaris is often used, like many hydra, as a model organism for morphallactic regeneration because they are easy to care for, requiring minimal direct care, and reproduce relatively quickly. It is reported that they do not undergo senescence, making them biologically immortal although this has been disputed.

Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source) Taxonomy ID 6087

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_038396675.1].

The total length of the assembly is 911675201 bp contained within 15 scaffolds. The scaffold N50 value is 61145917, the scaffold L50 value is 7. The GC% content of the assembly is 27.5%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_038396675.1.

Metazoa displaying genes imported from NCBI RefSeq annotation release GCF_038396675.1-RS_2024_06. Small RNA features, protein features, BLAST hits and cross-references have been computed by metazoa.

Statistics

Summary

AssemblyHydraT2T_AEP, INSDC Assembly GCA_038396675.1,
Database version115.1
Golden Path Length911,675,201
Genebuild byNCBI RefSeq
Genebuild methodImport
Data sourceUniversity of Vienna

Gene counts

Coding genes22,837
Non coding genes5,640
Small non coding genes800
Long non coding genes4,762
Misc non coding genes78
Pseudogenes491
Gene transcripts42,326