Orbicella faveolata (Mountainous star coral, FL) Assembly and Gene Annotation
About Orbicella faveolata
Orbicella faveolata, commonly known as mountainous star coral, is a colonial stony coral in the family Merulinidae. It is native to the Caribbean Sea and the Gulf of Mexico and is listed as "endangered" by the International Union for Conservation of Nature. This species was formerly known as Montastraea faveolata.
Picture credit: Public domain via Wikimedia Commons (Image source)
Taxonomy ID 48498
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_002042975.1].
The total length of the assembly is 485548939 bp contained within 1933 scaffolds. The scaffold N50 value is 1162446, the scaffold L50 value is 124. Assembly gaps span 129534296 bp. The GC% content of the assembly is 39.0%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | ofav_dov_v1, INSDC Assembly GCA_002042975.1, |
Database version | 113.1 |
Golden Path Length | 485,548,939 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Smithsonian Tropical Research Institute |
Gene counts
Coding genes | 25,929 |
Non coding genes | 3,180 |
Small non coding genes | 749 |
Long non coding genes | 2,431 |
Pseudogenes | 1,070 |
Gene transcripts | 37,785 |