
Sarcoptes scabiei (Itch mite, X4-3) Assembly and Gene Annotation
About Sarcoptes scabiei
Sarcoptes scabiei or the itch mite is a parasitic mite found in all parts of the world that burrows into skin and causes scabies. Humans become infested by Sarcoptes scabiei var. hominis; other mammals can be infested with different varieties of the mite. They include wild and domesticated dogs and cats, ungulates, wild boars, bovids, wombats, koalas, and great apes.
Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source) Taxonomy ID 52283
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_020844145.1].
The total length of the assembly is 57283228 bp contained within 9 scaffolds. The scaffold N50 value is 6519198, the scaffold L50 value is 5. The GC% content of the assembly is 33.0%.
Annotation
Metazoa displaying genes imported from GenBank entry linked to the assembly with accession GCA_020844145.1.
Genomic annotation was deposited along with initial assembly submission by "College of Veterinary Medicine, Sichuan Agricultural University".
Small RNA features, protein features, BLAST hits and cross-references have been computed by metazoa.
Statistics
Summary
Assembly | ASM2084414v1, INSDC Assembly GCA_020844145.1, |
Database version | 115.1 |
Golden Path Length | 57,297,147 |
Genebuild by | College of Veterinary Medicine, Sichuan Agricultural University |
Genebuild method | Import |
Data source | College of Veterinary Medicine, Sichuan Agricultural University |
Gene counts
Coding genes | 9,331 |
Non coding genes | 125 |
Small non coding genes | 125 |
Gene transcripts | 9,456 |