Sarcoptes scabiei (Itch mite, X4-3) (ASM2084414v1)

Sarcoptes scabiei (Itch mite, X4-3) Assembly and Gene Annotation

About Sarcoptes scabiei

Sarcoptes scabiei or the itch mite is a parasitic mite found in all parts of the world that burrows into skin and causes scabies. Humans become infested by Sarcoptes scabiei var. hominis; other mammals can be infested with different varieties of the mite. They include wild and domesticated dogs and cats, ungulates, wild boars, bovids, wombats, koalas, and great apes.

Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source) Taxonomy ID 52283

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_020844145.1].

The total length of the assembly is 57283228 bp contained within 9 scaffolds. The scaffold N50 value is 6519198, the scaffold L50 value is 5. The GC% content of the assembly is 33.0%.

Annotation

Metazoa displaying genes imported from GenBank entry linked to the assembly with accession GCA_020844145.1.

Genomic annotation was deposited along with initial assembly submission by "College of Veterinary Medicine, Sichuan Agricultural University".

Small RNA features, protein features, BLAST hits and cross-references have been computed by metazoa.

Statistics

Summary

AssemblyASM2084414v1, INSDC Assembly GCA_020844145.1,
Database version115.1
Golden Path Length57,297,147
Genebuild byCollege of Veterinary Medicine, Sichuan Agricultural University
Genebuild methodImport
Data sourceCollege of Veterinary Medicine, Sichuan Agricultural University

Gene counts

Coding genes9,331
Non coding genes125
Small non coding genes125
Gene transcripts9,456