
Stomoxys calcitrans Assembly and Gene Annotation
About Stomoxys calcitrans
Stomoxys calcitrans is commonly called the stable fly (Stomoxys calcitrans), barn fly, biting house fly, dog fly, or power mower fly. Unlike most members of the family Muscidae, Stomoxys calcitrans and others of its genus suck blood from mammals. Now found worldwide, the species is considered to be of Eurasian or African origin.
Picture credit: GNU Free Documentation License 1.2 via Wikimedia Commons (Image source) Taxonomy ID 35570
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_963082655.1].
The total length of the assembly is 1070934565 bp contained within 297 scaffolds. The scaffold N50 value is 199748301, the scaffold L50 value is 3. The GC% content of the assembly is 38.5%.
Annotation
Metazoa displaying genes linked to the assembly with accession GCA_963082655.1.
Genomic assembly deposited to the INSDC by Wellcome Sanger Institute. Genome annotation performed by Ensembl as part of the partnership with the Darwin Tree of Life (DToL) project.
Genome annotation was obtained using re-engineered versions of our Gene Annotation System Aken et al. with refinements implemented for non-vertebrate genomic annotation.
Find more information regarding DToL and Ensembl partnership here.
Statistics
Summary
Assembly | idStoCalc2.1, INSDC Assembly GCA_963082655.1, |
Database version | 115.1 |
Golden Path Length | 1,070,934,565 |
Genebuild by | RefSeq |
Genebuild method | Import |
Data source | RefSeq |
Gene counts
Coding genes | 15,178 |
Non coding genes | 3,141 |
Small non coding genes | 896 |
Long non coding genes | 2,234 |
Misc non coding genes | 11 |
Pseudogenes | 143 |
Gene transcripts | 30,368 |