Tribolium castaneum (Red flour beetle, GA2) (icTriCast1.1)

Tribolium castaneum (Red flour beetle, GA2) Assembly and Gene Annotation

About Tribolium castaneum

The red flour beetle (Tribolium castaneum) is a species of beetle in the family Tenebrionidae, the darkling beetles. The red flour beetle, and other closely related beetles like Gnatocerus cornutus, are a worldwide pest of stored products, particularly food grains, and a model organism for ethological and food safety research.

Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 7070

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_031307605.1].

The total length of the assembly is 241845558 bp contained within 148 scaffolds. The scaffold N50 value is 20636470, the scaffold L50 value is 5. The GC% content of the assembly is 31.5%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_031307605.1.

Metazoa displaying genes imported from NCBI RefSeq annotation release GCF_031307605.1-RS_2024_04. Small RNA features, protein features, BLAST hits and cross-references have been computed by metazoa.

Statistics

Summary

AssemblyicTriCast1.1, INSDC Assembly GCA_031307605.1,
Database version115.1
Golden Path Length241,861,439
Genebuild byNCBI RefSeq
Genebuild methodImport
Data sourceUnited States Department of Agriculture

Gene counts

Coding genes12,172
Non coding genes3,233
Small non coding genes1,228
Long non coding genes1,704
Misc non coding genes301
Pseudogenes113
Gene transcripts27,610