Aethina tumida (Small hive beetle, Nest 87) Assembly and Gene Annotation
About Aethina tumida
The small hive beetle (Aethina tumida) is a beekeeping pest. It is native to sub-Saharan Africa, but has spread to many other locations, including North America, Australia, and the Philippines.
The small hive beetle can be a destructive pest of honey bee colonies, causing damage to comb, stored honey, and pollen. If a beetle infestation is sufficiently heavy, they may cause bees to abandon their hive. Its presence can also be a marker in the diagnosis of colony collapse disorder for honey bees. The beetles can also be a pest of stored combs, and honey (in the comb) awaiting extraction. Beetle larvae may tunnel through combs of honey, feeding and defecating, causing discoloration and fermentation of the honey.
Picture credit: Creative Commons Attribution 3.0 via Wikimedia Commons (Image source) Taxonomy ID 116153
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_024364675.1].
The total length of the assembly is 259984281 bp contained within 9 scaffolds. The scaffold N50 value is 36783356, the scaffold L50 value is 3. Assembly gaps span 2900 bp. The GC% content of the assembly is 28.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_024364675.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | icAetTumi1.1, INSDC Assembly GCA_024364675.1, |
Database version | 113.1 |
Golden Path Length | 259,984,281 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | USDA Ag100Pest Initiative Working Group |
Gene counts
Coding genes | 13,131 |
Non coding genes | 1,959 |
Small non coding genes | 786 |
Long non coding genes | 1,172 |
Misc non coding genes | 1 |
Pseudogenes | 67 |
Gene transcripts | 24,199 |