Anopheles merus (Mosquito, MAF) Assembly and Gene Annotation
About Anopheles merus
Range
Anopheles merus belongs to the Anopheles gambiae species complex, which consists of at least seven species, and it is a locally important vector in eastern and southern Africa where it is mainly found along the coast.
Habitats
An. merus is found in high numbers in shallow brackish pools and marsh or swamp areas along the coast. As a consequence, this species does not exhibit density changes in response to tidal fluctuations nor does it appear to tolerate very high levels of salinity. It is rarely found in the mangrove forests on the east coast of Africa, however this may be due to the composition of the trees and soil type under of the stands of mangrove in this zone rather than inherent behavioural patterns. An. merus is known to occur inland, using salt pans and saline pools as larval habitats.
Resting and feeding preferences
An. merus is generally opportunistic in host selection, depending on host availability and females have a tendency to bite and rest outdoors. The biting times of An. merus on the Kenyan coast have been reported as gradually rising from early evening (18:00) peaking between midnight and 01:00 and then declining until 06:00, which reflects the accepted biting pattern for this species across its range.
Vectorial capacity
An. merus has previously been considered as only a minor or unimportant vector, however, it has been identified as playing an unexpectedly important role along the Tanzanian coast and more recently in Mozambique.
This text was modified from Sinka ME et al. (2010) The dominant Anopheles vectors of human malaria in Africa, Europe and the Middle East: occurrence data, distribution maps and bionomic précis Parasites & Vectors 3:117.
MAF strain
Originally isolated from South Africa (Mafayeni, Kruger National Park), isofemale selection was performed prior to genome sequencing. This strain is available from BEI resources.
Source: VectorBase
Picture credit: James Gathany, CDC Public domain via Wikimedia Commons (Image source)
AmerM2 assembly
Asssembled and submitted by Broad Institute.
AmerM2.10 gene set
Community annotation patch build for July 2019
References
- The dominant Anopheles vectors of human malaria in Africa, Europe
and the Middle East: occurrence data, distribution maps and bionomic
prcis.
Sinka ME, Bangs MJ, Manguin S, Coetzee M, Mbogo CM, Hemingway J, Patil AP, Temperley WH, Gething PW, Kabaria CW et al. 2010. Parasit Vectors. 3:117.
Picture credit: VectorBase.org
Statistics
Summary
Assembly | AmerM2, INSDC Assembly GCA_000473845.2, Apr 2014 |
Database version | 113.2 |
Golden Path Length | 288,048,996 |
Genebuild by | VEuPathDB |
Genebuild method | Import |
Data source | VectorBase |
Gene counts
Coding genes | 13,150 |
Non coding genes | 428 |
Small non coding genes | 426 |
Long non coding genes | 2 |
Gene transcripts | 13,772 |
Other
Short Variants | 6,612,165 |