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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC409865

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Description

protein retinal degeneration B, transcript variant X2

Location

Primary_assembly CM009933.2: 5,441,090-5,465,258 forward strand.

Amel_HAv3.1:CM009933.2

About this gene

This gene has 14 transcripts (splice variants), 77 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	XM_016911166	6153	1270aa	XP_016766655	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVI9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_016911168	6146	1270aa	XP_016766657	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVI9	-	-
-	XM_006560935	6099	1252aa	XP_006560998	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_006560936	6096	1251aa	XP_006560999	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_006560937	6069	1242aa	XP_006561000	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_006560938	6065	1241aa	XP_006561001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_006560933	5750	1270aa	XP_006560996	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVI9	-	-
-	XM_016911167	5731	1270aa	XP_016766656	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVI9	-	-
-	XM_016911169	5627	1270aa	XP_016766658	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVI9	-	-
-	XM_006560934	4421	1260aa	XP_006560997	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_016911170	4317	1138aa	XP_016766659	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XR_408921	6715	No protein	-	Nontranslating CDS	-	-	-
-	XR_001702357	6481	No protein	-	Nontranslating CDS	-	-	-
-	XR_408920	6365	No protein	-	Nontranslating CDS	-	-	-

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Summary

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