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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: LOC100127019

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Description

calpain protein, transcript variant X2

Location

Primary_assembly BHWX01000024.1: 5,877,342-5,955,125 reverse strand.

Bmori_2016v1.0:BHWX01000024.1

About this gene

This gene has 10 transcripts (splice variants), 76 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_038020139.1	5014	959aa	XP_037876067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9IS71	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_038020141.1	5102	949aa	XP_037876069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_038020142.1	5090	949aa	XP_037876070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_038020143.1	4891	863aa	XP_037876071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9IS69	-
-	XM_038020144.1	4837	832aa	XP_037876072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_038020146.1	4831	832aa	XP_037876074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_038020145.1	4817	832aa	XP_037876073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_021353417.2	4774	879aa	XP_021209092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_038020147.1	4708	832aa	XP_037876075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_004923073.4	4577	752aa	XP_004923130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8NB52 H9IS70	-

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Summary

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