Bombyx mori (Domestic silkworm, p50T) Assembly and Gene Annotation
About Bombyx mori
The silkworm, Bombyx mori, has been used for silk production for over 5,000 years, and continues to be an economically important species. B. mori is a fully domesticated insect, and due to its ease of culture, the silkworm has become a model organism in the study of lepidopteran and arthropod biology [1,2].
Picture credit (Creative Commons BY-SA 3.0): Wikimedia Commons 2009
Assembly
The assembly presented is the Bmori_2016v1.0 assembly submitted to INSDC with the assembly accession GCA_014905235.2.
Annotation
Ensembl Metazoa displays the genes from NCBI Bombyx mori Annotation Release 103. Small RNA features, protein features and cross-references have been annotated by Ensembl Metazoa.
References
- The genetics and genomics of the silkworm, Bombyx
mori.
Goldsmith MR, Shimada T, Abe H. 2005. Annual Review of Entomology. 50:71-100. - Advances in silkworm studies accelerated by the genome sequencing
of Bombyx mori.
Xia Q, Li S, Feng Q. 2014. Annual Review of Entomology. 59:513-536. - The genome of a lepidopteran model insect, the silkworm Bombyx
mori.
International Silkworm Genome Consortium. 2008. Insect Biochemistry and Molecular Biology. 38:1036-1045. - KAIKObase: an integrated silkworm genome database and data mining
tool.
Shimomura M, Minami H, Suetsugu Y, Ohyanagi H, Satoh C, Antonio B, Nagamura Y, Kadono-Okuda K, Kajiwara H, Sezutsu H et al. 2009. BMC Genomics. 10:486. - SilkDB v2.0: a platform for silkworm (Bombyx mori) genome
biology.
Duan J, Li R, Cheng D, Fan W, Zha X, Cheng T, Wu Y, Wang J, Mita K, Xiang Z et al. 2010. Nucleic Acids Research. 38:D453-6.
Statistics
Summary
Assembly | Bmori_2016v1.0, INSDC Assembly GCA_014905235.2, |
Database version | 113.2 |
Golden Path Length | 460,349,660 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Graduate School of Agricultural and Life Sciences, The University of Tokyo |
Gene counts
Coding genes | 13,881 |
Non coding genes | 2,815 |
Small non coding genes | 1,255 |
Long non coding genes | 1,547 |
Misc non coding genes | 13 |
Pseudogenes | 376 |
Gene transcripts | 32,123 |