Partitioning defective protein 3 [Source:NCBI gene;Acc:175783]
Chromosome III: 5,664,233-5,676,795 forward strand.
WBcel235:BX284603.4
This gene has 16 transcripts (splice variants) and 83 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | F54E7.3i.1 | 5019 | 1533aa | F54E7.3i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PRH0 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | F54E7.3h.1 | 5010 | 1530aa | F54E7.3h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PM75 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F54E7.3b.1 | 4909 | 1379aa | F54E7.3b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17353 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F54E7.3a.1 | 4900 | 1376aa | F54E7.3a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17353 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F54E7.3b.2 | 4894 | 1379aa | F54E7.3b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17353 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F54E7.3b.3 | 4844 | 1379aa | F54E7.3b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17353 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| par-3-215 | F54E7.3d.1 | 4707 | 1454aa | F54E7.3d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PRG6 | - | - |
| par-3-216 | F54E7.3c.1 | 4706 | 1340aa | F54E7.3c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17353 | - | - |
| par-3-213 | F54E7.3e.1 | 4692 | 1451aa | F54E7.3e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PEL6 | - | - |
| - | F54E7.3j.1 | 4690 | 1327aa | F54E7.3j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PEM0 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| par-3-211 | F54E7.3c.2 | 4522 | 1340aa | F54E7.3c.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q17353 | - | - |
| par-3-214 | F54E7.3f.1 | 4519 | 1297aa | F54E7.3f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PBE2 | - | - |
| par-3-212 | F54E7.3l.1 | 4317 | 1248aa | F54E7.3l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PBS3 | - | - |
| - | F54E7.3k.1 | 3993 | 1330aa | F54E7.3k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PBE6 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | F54E7.3g.1 | 3903 | 1300aa | F54E7.3g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PBR8 | - | - |
| par-3-210 | F54E7.3m.1 | 3756 | 1251aa | F54E7.3m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | U4PM79 | - | - |
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