Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by WormBase

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Gene: unc-52 WBGene00006787

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Description

Basement membrane proteoglycan; Ig-like domain-containing protein [Source:NCBI gene;Acc:175126]

Location

Chromosome II: 14,647,321-14,684,456 reverse strand.

WBcel235:BX284602.5

About this gene

This gene has 17 transcripts (splice variants), 315 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZC101.2d.1	12546	4075aa	ZC101.2d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEI5	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	ZC101.2e.1	10128	3375aa	ZC101.2e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
unc-52-216	ZC101.2r.1	9816	3271aa	ZC101.2r.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1T5HUZ1	-	-
-	ZC101.2a.1	7968	2482aa	ZC101.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
-	ZC101.2o.1	7855	2479aa	ZC101.2o.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G350	-	-
-	ZC101.2f.1	7678	2389aa	ZC101.2f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
-	ZC101.2n.1	7582	2388aa	ZC101.2n.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G349	-	-
-	ZC101.2m.1	7567	2383aa	ZC101.2m.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G348	-	-
unc-52-210	ZC101.2c.1	7393	2295aa	ZC101.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
unc-52-212	ZC101.2j.1	7278	2289aa	ZC101.2j.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G354	-	-
unc-52-211	ZC101.2i.1	7096	2196aa	ZC101.2i.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G353	-	-
unc-52-214	ZC101.2k.1	6891	2296aa	ZC101.2k.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G351	-	-
unc-52-215	ZC101.2l.1	6672	2193aa	ZC101.2l.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G352	-	-
unc-52-217	ZC101.2b.1	3956	1160aa	ZC101.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
-	ZC101.2g.1	2631	876aa	ZC101.2g.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K109	-	-
unc-52-213	ZC101.2p.1	414	137aa	ZC101.2p.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PS79	-	-
-	ZC101.2q	692	No protein	-	A non-coding gene.ncRNA	-	-	-

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Summary

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