PDZ Domain containing [Source:NCBI gene;Acc:177716]
Chromosome IV: 8,975,526-8,984,579 forward strand.
WBcel235:BX284604.4
This gene has 11 transcripts (splice variants) and 61 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | C53B4.4e.1 | 4664 | 1323aa | C53B4.4e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A5JYS5 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C53B4.4h.1 | 4660 | 1325aa | C53B4.4h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WVD0 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C53B4.4k.1 | 4659 | 1365aa | C53B4.4k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WTK6 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C53B4.4i.1 | 4653 | 1322aa | C53B4.4i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WWK3 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C53B4.4j.1 | 4647 | 1320aa | C53B4.4j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WXK7 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C53B4.4b.1 | 4639 | 1362aa | C53B4.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q18798 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C53B4.4a.1 | 4634 | 1360aa | C53B4.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7JM28 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| pdzd-8-211 | C53B4.4l.1 | 4538 | 1363aa | C53B4.4l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A486WX00 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| pdzd-8-210 | C53B4.4d.1 | 4352 | 1301aa | C53B4.4d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5WRP6 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C53B4.4g.1 | 3912 | 1303aa | C53B4.4g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5LXA1 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C53B4.4f.1 | 3795 | 1264aa | C53B4.4f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | X5LQ14 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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