Transcript: ZC101.2e.1

Description

Basement membrane proteoglycan; Ig-like domain-containing protein [Source:NCBI gene;Acc:175126]

Location

Chromosome II: 14,647,479-14,666,852 reverse strand.

About this transcript

This transcript has 35 exons and is annotated with 204 domains and features.

Gene

This transcript is a product of gene WBGene00006787 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	ZC101.2d.1	12546	4075aa	ZC101.2d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G5EEI5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
-	ZC101.2e.1	10128	3375aa	ZC101.2e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
unc-52-216	ZC101.2r.1	9816	3271aa	ZC101.2r.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1T5HUZ1	-	-
-	ZC101.2a.1	7968	2482aa	ZC101.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
-	ZC101.2o.1	7855	2479aa	ZC101.2o.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G350	-	-
-	ZC101.2f.1	7678	2389aa	ZC101.2f.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
-	ZC101.2n.1	7582	2388aa	ZC101.2n.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G349	-	-
-	ZC101.2m.1	7567	2383aa	ZC101.2m.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G348	-	-
unc-52-210	ZC101.2c.1	7393	2295aa	ZC101.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
unc-52-212	ZC101.2j.1	7278	2289aa	ZC101.2j.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G354	-	-
unc-52-211	ZC101.2i.1	7096	2196aa	ZC101.2i.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G353	-	-
unc-52-214	ZC101.2k.1	6891	2296aa	ZC101.2k.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G351	-	-
unc-52-215	ZC101.2l.1	6672	2193aa	ZC101.2l.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G352	-	-
unc-52-217	ZC101.2b.1	3956	1160aa	ZC101.2b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q06561	-	-
-	ZC101.2g.1	2631	876aa	ZC101.2g.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1K109	-	-
unc-52-213	ZC101.2p.1	414	137aa	ZC101.2p.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U4PS79	-	-
-	ZC101.2q	692	No protein	-	A non-coding gene.ncRNA	-	-	-

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 10,128 bps, Translation length: 3,375 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06561

Version

ZC101.2e.1

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase

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Transcript: ZC101.2e.1

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Transcript: ZC101.2e.1

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