Ceratitis capitata (Mediterranean fruit fly) Assembly and Gene Annotation
About Ceratitis capitata
Ceratitis capitata, commonly known as the Mediterranean fruit fly (Ceratitis capitata) or medfly is a yellow and brown fly native to sub-Saharan Africa. C. capitata has no near relatives in the Western Hemisphere and is considered to be one of the most destructive fruit pests in the world. There have been occasional medfly infestations in the states of California, Florida, and Texas requiring extensive eradication efforts to prevent the fly from establishing itself in the US.
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Taxonomy ID 7213
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_000347755.3].
The total length of the assembly is 436490799 bp contained within 2355 scaffolds. The scaffold N50 value is 1665634, the scaffold L50 value is 75. Assembly gaps span 700227 bp. The GC% content of the assembly is 35.0%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v103. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Ccap_2.0, INSDC Assembly GCA_000347755.4, |
Database version | 113.1 |
Golden Path Length | 436,490,799 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | The BCM-HGSC i5K pilot project |
Gene counts
Coding genes | 12,563 |
Non coding genes | 1,588 |
Small non coding genes | 511 |
Long non coding genes | 1,068 |
Misc non coding genes | 9 |
Pseudogenes | 109 |
Gene transcripts | 25,469 |