Diabrotica virgifera virgifera (Western corn rootworm, Ped12-6-A-3) Assembly and Gene Annotation
About Diabrotica virgifera virgifera
The Western corn rootworm, Diabrotica virgifera virgifera, is one of the most devastating corn rootworm species in North America, especially in the midwestern corn-growing areas such as Iowa. A related species, the Northern corn rootworm, D. barberi, co-inhabits in much of the range and is fairly similar in biology.
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Taxonomy ID 50390
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_003013835.1].
The total length of the assembly is 2418073815 bp contained within 87712 scaffolds. The scaffold N50 value is 489108, the scaffold L50 value is 1128. Assembly gaps span 567381616 bp. The GC% content of the assembly is 33.0%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Dvir_v2.0, INSDC Assembly GCA_003013835.2, |
Database version | 113.1 |
Golden Path Length | 2,418,073,815 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Department of Entomology, University of Illinois at Urbana-Champaign |
Gene counts
Coding genes | 20,592 |
Non coding genes | 4,502 |
Small non coding genes | 903 |
Long non coding genes | 3,599 |
Pseudogenes | 304 |
Gene transcripts | 33,280 |