Diabrotica virgifera virgifera (Western corn rootworm) (PGI_DIABVI_V3a)

Diabrotica virgifera virgifera (Western corn rootworm) Assembly and Gene Annotation

About Diabrotica virgifera virgifera

The Western corn rootworm, Diabrotica virgifera virgifera, is one of the most devastating corn rootworm species in North America, especially in the midwestern corn-growing areas such as Iowa. A related species, the Northern corn rootworm, D. barberi, co-inhabits in much of the range and is fairly similar in biology.

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Taxonomy ID 50390

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_917563875.1].

The total length of the assembly is 2533404242 bp contained within 10 scaffolds. The scaffold N50 value is 264456228, the scaffold L50 value is 5. Assembly gaps span 309427 bp. The GC% content of the assembly is 33.0%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_917563875.1.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyPGI_DIABVI_V3a, INSDC Assembly GCA_917563875.2,
Database version113.1
Golden Path Length2,533,404,242
Genebuild byNCBI
Genebuild methodImport
Data sourceRothamsted Research

Gene counts

Coding genes19,526
Non coding genes5,234
Small non coding genes1,144
Long non coding genes4,086
Misc non coding genes4
Pseudogenes208
Gene transcripts38,704