Diabrotica virgifera virgifera (Western corn rootworm) Assembly and Gene Annotation
About Diabrotica virgifera virgifera
The Western corn rootworm, Diabrotica virgifera virgifera, is one of the most devastating corn rootworm species in North America, especially in the midwestern corn-growing areas such as Iowa. A related species, the Northern corn rootworm, D. barberi, co-inhabits in much of the range and is fairly similar in biology.
Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source)
Taxonomy ID 50390
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_917563875.1].
The total length of the assembly is 2533404242 bp contained within 10 scaffolds. The scaffold N50 value is 264456228, the scaffold L50 value is 5. Assembly gaps span 309427 bp. The GC% content of the assembly is 33.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_917563875.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | PGI_DIABVI_V3a, INSDC Assembly GCA_917563875.2, |
Database version | 113.1 |
Golden Path Length | 2,533,404,242 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Rothamsted Research |
Gene counts
Coding genes | 19,526 |
Non coding genes | 5,234 |
Small non coding genes | 1,144 |
Long non coding genes | 4,086 |
Misc non coding genes | 4 |
Pseudogenes | 208 |
Gene transcripts | 38,704 |