Dinothrombium tinctorium (Red velvet mite, UoL-WK) Assembly and Gene Annotation
About Dinothrombium tinctorium
Red velvet mites or rain bugs are arachnids found in soil litter known for their bright red color which are often mistaken for spiders.
Text from Wikipedia. Picture credit (public domain): Ton Rulkens [CC BY-SA 2.0 (https://creativecommons.org/licenses/by-sa/2.0)]
Assembly
The Dinothrombium tinctorium genome was sequenced and assembled at the University of Liverpool.
Annotation
The gene models were predicted at University of Liverpool and submitted to NCBI from where Ensembl Genomes imported the data. Non-coding RNA genes were added using the Ensembl Genomes pipeline.
References
- Genomes of trombidid mites reveal novel predicted allergens and
laterally transferred genes associated with secondary
metabolism.
Xiaofeng Dong, Kittipong Chaisiri, Dong Xia, Stuart D. Armstrong, Yongxiang Fang, Martin J. Donnelly, Tatsuhiko Kadowaki, John W. McGarry, Alistair C. Darby, Benjamin L. Makepeace. 2018. Gigascience. Volume 7, Issue 12
Picture credit: Ton Rulkens [CC BY-SA 2.0 (https://creativecommons.org/licenses/by-sa/2.0)]
Statistics
Summary
Assembly | DtinU1, INSDC Assembly GCA_003675995.1, |
Database version | 113.1 |
Golden Path Length | 180,399,227 |
Genebuild by | VectorBase |
Genebuild method | Import |
Data source | University of Liverpool |
Gene counts
Coding genes | 19,024 |
Gene transcripts | 19,024 |