Drosophila albomicans (Fruit fly, 15112-1751.03) Assembly and Gene Annotation
About Drosophila albomicans
Drosophila albomicans is a species of vinegar fly in the family Drosophilidae. Drosophila albomicans is a member of the Immigrans-tripunctata radiation of the subgenus Drosophila. The D. albomicans genome was first sequenced in 2012 to study the evolution of novel sex chromosomes, a characteristic this species is best known for. One commonly accepted definition of the biological species concept is that individuals or populations are members of different species if they are incapable of successful interbreeding. While D. albomicans and Drosophila nasuta are commonly referred to as distinct species, there appears to be little to no sexual isolation between these two Drosophila species. Instead, behavioural differences appear to reproductively isolate these two species.
Picture credit (related species D. pseudoobscura): Public domain via Wikimedia Commons (Image source)
Taxonomy ID 7291
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_009650485.2].
The total length of the assembly is 167525814 bp contained within 219 scaffolds. The scaffold N50 value is 35291776, the scaffold L50 value is 2. The GC% content of the assembly is 38.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_009650485.2.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | ASM965048v2, INSDC Assembly GCA_009650485.2, |
Database version | 113.1 |
Golden Path Length | 167,525,814 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | University of California Berkeley |
Gene counts
Coding genes | 14,002 |
Non coding genes | 1,358 |
Small non coding genes | 596 |
Long non coding genes | 756 |
Misc non coding genes | 6 |
Pseudogenes | 245 |
Gene transcripts | 26,831 |