Drosophila albomicans (Fruit fly, 15112-1751.03) (ASM965048v2)

Drosophila albomicans (Fruit fly, 15112-1751.03) Assembly and Gene Annotation

About Drosophila albomicans

Drosophila albomicans is a species of vinegar fly in the family Drosophilidae. Drosophila albomicans is a member of the Immigrans-tripunctata radiation of the subgenus Drosophila. The D. albomicans genome was first sequenced in 2012 to study the evolution of novel sex chromosomes, a characteristic this species is best known for. One commonly accepted definition of the biological species concept is that individuals or populations are members of different species if they are incapable of successful interbreeding. While D. albomicans and Drosophila nasuta are commonly referred to as distinct species, there appears to be little to no sexual isolation between these two Drosophila species. Instead, behavioural differences appear to reproductively isolate these two species.

Picture credit (related species D. pseudoobscura): Public domain via Wikimedia Commons (Image source)

Taxonomy ID 7291

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_009650485.2].

The total length of the assembly is 167525814 bp contained within 219 scaffolds. The scaffold N50 value is 35291776, the scaffold L50 value is 2. The GC% content of the assembly is 38.0%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_009650485.2.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyASM965048v2, INSDC Assembly GCA_009650485.2,
Database version113.1
Golden Path Length167,525,814
Genebuild byNCBI
Genebuild methodImport
Data sourceUniversity of California Berkeley

Gene counts

Coding genes14,002
Non coding genes1,358
Small non coding genes596
Long non coding genes756
Misc non coding genes6
Pseudogenes245
Gene transcripts26,831