Drosophila biarmipes (Fruit fly, raj3) Assembly and Gene Annotation
About Drosophila biarmipes
Drosophila biarmipes, is part of the Drosophila suzukii subgroup. The closely related species D. suzukii, originally from southeast Asia, is becoming a major pest species in America and Europe, because it infests fruit early during the ripening stage, in contrast with other Drosophila species that infest only rotting fruit.
Picture credit (related species S. suzukii edited to single specimen, no scale): Shane F. McEvey, Australian Museum Creative Commons Attribution 4.0 via Wikimedia Commons (Image source)
Taxonomy ID 125945
(Text adapted from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_025231255.1].
The total length of the assembly is 193597863 bp contained within 51 scaffolds. The scaffold N50 value is 26917925, the scaffold L50 value is 4. The GC% content of the assembly is 41.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_025231255.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v103. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | RU_DBia_V1.1, INSDC Assembly GCA_025231255.1, |
Database version | 113.1 |
Golden Path Length | 193,597,863 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | The Rockefeller University |
Gene counts
Coding genes | 14,472 |
Non coding genes | 2,213 |
Small non coding genes | 1,352 |
Long non coding genes | 856 |
Misc non coding genes | 5 |
Pseudogenes | 373 |
Gene transcripts | 30,438 |