Drosophila innubila (Fruit fly, TH190305) Assembly and Gene Annotation
About Drosophila innubila
Drosophila innubila is a species of vinegar fly restricted to high-elevation woodlands in the mountains of the southern USA and Mexico, which it likely colonized during the last glacial period. Drosophila innubila is a kind of mushroom-breeding Drosophila, and member of the Drosophila quinaria species group. Drosophila innubila is best known for its association with a strain of male-killing Wolbachia bacteria. These bacteria are parasitic, as they drain resources from the host and cause half the infected female's eggs to abort. However Wolbachia may offer benefits to the fly's fitness in certain circumstances. The D. innubila genome was sequenced in 2019.
Picture credit: CC BY-SA 4.0 via Wikimedia Commons (Image source)
Taxonomy ID 198719
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_004354385.1].
The total length of the assembly is 167978031 bp contained within 363 scaffolds. The scaffold N50 value is 29570363, the scaffold L50 value is 3. The GC% content of the assembly is 36.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_004354385.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | UK_Dinn_1.0, INSDC Assembly GCA_004354385.1, |
Database version | 113.1 |
Golden Path Length | 167,978,031 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | University of Kansas |
Gene counts
Coding genes | 13,595 |
Non coding genes | 1,345 |
Small non coding genes | 552 |
Long non coding genes | 793 |
Pseudogenes | 154 |
Gene transcripts | 21,453 |