Drosophila innubila (Fruit fly, TH190305) (UK_Dinn_1.0)

Drosophila innubila (Fruit fly, TH190305) Assembly and Gene Annotation

About Drosophila innubila

Drosophila innubila is a species of vinegar fly restricted to high-elevation woodlands in the mountains of the southern USA and Mexico, which it likely colonized during the last glacial period. Drosophila innubila is a kind of mushroom-breeding Drosophila, and member of the Drosophila quinaria species group. Drosophila innubila is best known for its association with a strain of male-killing Wolbachia bacteria. These bacteria are parasitic, as they drain resources from the host and cause half the infected female's eggs to abort. However Wolbachia may offer benefits to the fly's fitness in certain circumstances. The D. innubila genome was sequenced in 2019.

Picture credit: CC BY-SA 4.0 via Wikimedia Commons (Image source)

Taxonomy ID 198719

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_004354385.1].

The total length of the assembly is 167978031 bp contained within 363 scaffolds. The scaffold N50 value is 29570363, the scaffold L50 value is 3. The GC% content of the assembly is 36.5%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_004354385.1.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyUK_Dinn_1.0, INSDC Assembly GCA_004354385.1,
Database version112.1
Golden Path Length167,978,031
Genebuild byNCBI
Genebuild methodImport
Data sourceUniversity of Kansas

Gene counts

Coding genes13,595
Non coding genes1,345
Small non coding genes552
Long non coding genes793
Pseudogenes154
Gene transcripts21,453