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DB built by FlyBase

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Gene: RhoGAP92B FBgn0038747

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Description

Rho GTPase activating protein at 92B

Gene Synonyms

Location

Primary_assembly 3R: 19,905,164-19,914,272 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 5 transcripts (splice variants) and 81 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
RhoGAP92B-RE	FBtr0344354	3558	740aa	FBpp0310730	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RIZ2 Q9VDS5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
RhoGAP92B-RA	FBtr0083821	3016	740aa	FBpp0083230	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B5RIZ2 Q9VDS5	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
RhoGAP92B-RB	FBtr0344351	3013	739aa	FBpp0310727	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHC1	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
RhoGAP92B-RD	FBtr0344353	3001	648aa	FBpp0310729	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHN0	-	-
RhoGAP92B-RC	FBtr0344352	2626	543aa	FBpp0310728	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHC3	-	-

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Summary

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