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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
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Pan-taxonomic Compara
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- Orthologues
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- Variant table
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DB built by FlyBase

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Gene: CG42514 FBgn0260388

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Location

Primary_assembly 3L: 16,491,838-16,496,236 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 3 transcripts (splice variants), 339 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42514-RA	FBtr0300655	2150	533aa	FBpp0289879	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8E1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42514-RC	FBtr0300657	2087	531aa	FBpp0289881	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960A8 Q9I7R2	-	-
CG42514-RB	FBtr0300656	2064	533aa	FBpp0289880	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TP72 Q0E8E1 Q8MZE0	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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