Summary
- Splice variants
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DB built by FlyBase

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Gene: Men FBgn0002719

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Description

Malic enzyme

Gene Synonyms

Location

Primary_assembly 3R: 12,713,103-12,722,442 reverse strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 90 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Men-RB	FBtr0082660	2906	763aa	FBpp0082129	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H7BWS2 H7BWS6 H7BWU6 H7BWU8 Q9NIW2 Q9VG31	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Men-RA	FBtr0082661	2767	759aa	FBpp0082130	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H7BWS3 Q9NIW0 Q9NIW1 Q9VG32	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Men-RC	FBtr0330025	2364	578aa	FBpp0303058	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2QBM1	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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