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DB built by FlyBase

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Gene: Ogdh FBgn0010352

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Description

Oxoglutarate dehydrogenase

Gene Synonyms

Location

Primary_assembly 3L: 16,954,822-16,968,724 forward strand.

BDGP6.46:AE014296.5

About this gene

This gene has 9 transcripts (splice variants), 80 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ogdh-RJ	FBtr0333214	4376	1105aa	FBpp0305416	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNU6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Ogdh-RK	FBtr0481643	4387	1010aa	FBpp0428425	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IGI6	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Ogdh-RC	FBtr0075263	4384	1008aa	FBpp0075023	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVC5	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ogdh-RA	FBtr0075266	4381	1008aa	FBpp0075026	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVC5	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ogdh-RI	FBtr0112860	4028	1105aa	FBpp0111773	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8JNU6	-	-
Ogdh-RH	FBtr0075269	3742	1017aa	FBpp0075029	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQQ0	-	-
Ogdh-RF	FBtr0075267	3718	1017aa	FBpp0075027	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IQQ0	-	-
Ogdh-RB	FBtr0075264	3698	1008aa	FBpp0075024	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVC5	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Ogdh-RG	FBtr0075268	3691	1008aa	FBpp0075028	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVC5	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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