Summary
- Splice variants
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DB built by FlyBase

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Gene: CG31279 FBgn0051279

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Gene Synonyms

Location

Primary_assembly 3R: 16,430,681-16,432,897 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 6 transcripts (splice variants) and 8 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG31279-RB	FBtr0301433	1482	454aa	FBpp0290648	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V6U2 Q8INB4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
CG31279-RD	FBtr0310428	1525	445aa	FBpp0302576	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KG93 Q4V5H2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG31279-RC	FBtr0301434	1485	391aa	FBpp0290649	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIM7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG31279-RE	FBtr0310429	1454	391aa	FBpp0302577	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JIM7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG31279-RF	FBtr0337013	649	67aa	FBpp0307942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGS2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG31279-RG	FBtr0337014	643	129aa	FBpp0307943	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KHM0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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