▼

Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene tree (Drosophilidae)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: Rbp6 FBgn0260943

.

Description

RNA-binding protein 6

Gene Synonyms

Location

Primary_assembly 3L: 17,058,774-17,238,212 reverse strand.

BDGP6.46:AE014296.5

About this gene

This gene has 7 transcripts (splice variants), 68 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Rbp6-RB	FBtr0113427	4368	499aa	FBpp0112339	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Rbp6-RG	FBtr0333861	9015	371aa	FBpp0305994	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCV2	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Rbp6-RE	FBtr0310005	8403	259aa	FBpp0301711	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NG33	-	-
Rbp6-RF	FBtr0310006	4918	225aa	FBpp0301712	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NDB5	-	-
Rbp6-RC	FBtr0113428	2260	257aa	FBpp0112340	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D5AEM6 Q4V4E8	-	-
Rbp6-RA	FBtr0075285	2173	369aa	FBpp0075045	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVE5	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
Rbp6-RD	FBtr0290066	1441	162aa	FBpp0288505	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z063	-	-

.

Summary

.

.