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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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DB built by FlyBase

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Transcript: FBtr0087671 CG13330-RA

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Gene Synonyms

Location

Primary_assembly 2R: 13,515,259-13,517,452 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 13 domains and features.

Gene

This transcript is a product of gene FBgn0033848 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
CG13330-RA	FBtr0087671	2129	611aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9E4 Q8SZX6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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General identifiers

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This transcript corresponds to the following database identifiers:

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External database	Database identifier
European Nucleotide Archive	BT081389 [align] [view all locations]
FlyBase transcript	FBtr0087671 [view all locations]
FlyBase translation	FBpp0086791 [view all locations]
INSDC protein ID	AAF58364 [align] [view all locations] AAF58364.1 [align] [view all locations]
RefSeq DNA	NM_137036.3 [align] [view all locations]
RefSeq peptide	NP_610880 [align] [view all locations] NP_610880.1 [align] [view all locations]
STRING	7227.FBpp0086791 [view all locations]
UniParc	UPI0000079C8C [view all locations]
UniProtKB generic accession number (TrEMBL or SwissProt not differentiated)	A1Z9E4 [align] [view all locations]
UniProtKB/TrEMBL	A1Z9E4 [align] [view all locations] A1Z9E4 [align] MIP03776p [view all locations] Q8SZX6 [Target %id: 100; Query %id: 100] [align] LP03146p [view all locations]

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