Drosophila pseudoobscura (Fruit fly, MV2-25) (UCI_Dpse_MV25)

Drosophila pseudoobscura (Fruit fly, MV2-25) Assembly and Gene Annotation

About Drosophila pseudoobscura

Drosophila pseudoobscura is a species of fruit fly, used extensively in lab studies of speciation. It is native to western North America.

Picture credit: Public domain via Wikimedia Commons (Image source) Taxonomy ID 7237

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_009870125.1].

The total length of the assembly is 163266851 bp contained within 69 scaffolds. The scaffold N50 value is 32422566, the scaffold L50 value is 2. The GC% content of the assembly is 45.0%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_009870125.1.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v104. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyUCI_Dpse_MV25, INSDC Assembly GCA_009870125.2,
Database version112.1
Golden Path Length163,282,969
Genebuild byNCBI
Genebuild methodImport
Data sourceUniversity of California, Irvine

Gene counts

Coding genes14,343
Non coding genes2,410
Small non coding genes662
Long non coding genes1,748
Pseudogenes127
Gene transcripts30,614