Drosophila suzukii (Fruit fly, WT3_2.0) Assembly and Gene Annotation
About Drosophila suzukii
Drosophila suzukii, commonly called the spotted wing drosophila or SWD, is a fruit fly. D. suzukii, originally from southeast Asia, is becoming a major pest species in America and Europe, because it infests fruit early during the ripening stage, in contrast with other Drosophila species that infest only rotting fruit.
Picture credit (edited to single specimen, no scale): Shane F. McEvey, Australian Museum Creative Commons Attribution 4.0 via Wikimedia Commons (Image source)
Taxonomy ID 28584
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_013340165.1].
The total length of the assembly is 268012156 bp contained within 546 scaffolds. The scaffold N50 value is 2609782, the scaffold L50 value is 16. The GC% content of the assembly is 40.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_013340165.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v102. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | LBDM_Dsuz_2.1.pri, INSDC Assembly GCA_013340165.1, |
Database version | 113.1 |
Golden Path Length | 268,012,156 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Institut de Biologie du Developpement de Marseille |
Gene counts
Coding genes | 15,567 |
Non coding genes | 1,827 |
Small non coding genes | 769 |
Long non coding genes | 1,055 |
Misc non coding genes | 3 |
Pseudogenes | 145 |
Gene transcripts | 28,746 |