Halyomorpha halys (Brown marmorated stink bug, HHAL.00) Assembly and Gene Annotation
About Halyomorpha halys
The brown marmorated stink bug (Halyomorpha halys) is an insect in the family Pentatomidae, native to China, Japan, Korea, and other Asian regions. In September 1998, it was collected in Allentown, Pennsylvania, where it is believed to have been accidentally introduced. The nymphs and adults of the brown marmorated stink bug feed on over 100 species of plants, including many agricultural crops, and by 2010–11 had become a season-long pest in orchards in the Eastern United States. In 2010, in the Mid-Atlantic United States, $37 million in apple crops were lost, and some stone fruit growers lost more than 90% of their crops. Since the 2010s, the bug has spread to the nation of Georgia and Turkey and caused extensive damage to hazelnut production. It is now established in many parts of North America, and has recently become established in Europe and South America.
Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source) Taxonomy ID 286706
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_000696795.2].
The total length of the assembly is 998224378 bp contained within 16638 scaffolds. The scaffold N50 value is 393089, the scaffold L50 value is 724. The GC% content of the assembly is 31.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000696795.2.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Hhal_2.0, INSDC Assembly GCA_000696795.2, |
Database version | 113.1 |
Golden Path Length | 998,240,896 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | The i5k Initiative |
Gene counts
Coding genes | 14,467 |
Non coding genes | 2,202 |
Small non coding genes | 804 |
Long non coding genes | 1,388 |
Misc non coding genes | 10 |
Pseudogenes | 186 |
Gene transcripts | 28,490 |