Helicoverpa armigera (Cotton bollworm, SCD) Assembly and Gene Annotation
About Helicoverpa armigera
Helicoverpa armigera is a species of Lepidoptera in the family Noctuidae. It is known as the cotton bollworm (Helicoverpa armigera), corn earworm, Old World (African) bollworm, or scarce bordered straw. The larvae feed on a wide range of plants, including many important cultivated crops. It is a major pest in cotton and one of the most polyphagous and cosmopolitan pest species. It should not be confused with the similarly named larva of the related species Helicoverpa zea.
Picture credit: Creative Commons Attribution 2.5 via Wikimedia Commons (Image source)
Taxonomy ID 29058
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_023701775.1].
The total length of the assembly is 356685670 bp contained within 42 scaffolds. The scaffold N50 value is 12270862, the scaffold L50 value is 13. Assembly gaps span 7091 bp. The GC% content of the assembly is 36.5%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_023701775.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | HaSCD2, INSDC Assembly GCA_023701775.1, |
Database version | 113.1 |
Golden Path Length | 356,685,670 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | Nanjing Agricultural University |
Gene counts
Coding genes | 14,962 |
Non coding genes | 2,093 |
Small non coding genes | 767 |
Long non coding genes | 1,314 |
Misc non coding genes | 12 |
Pseudogenes | 24 |
Gene transcripts | 30,911 |