Helicoverpa armigera (Cotton bollworm, SCD) (HaSCD2)

Helicoverpa armigera (Cotton bollworm, SCD) Assembly and Gene Annotation

About Helicoverpa armigera

Helicoverpa armigera is a species of Lepidoptera in the family Noctuidae. It is known as the cotton bollworm (Helicoverpa armigera), corn earworm, Old World (African) bollworm, or scarce bordered straw. The larvae feed on a wide range of plants, including many important cultivated crops. It is a major pest in cotton and one of the most polyphagous and cosmopolitan pest species. It should not be confused with the similarly named larva of the related species Helicoverpa zea.

Picture credit: Creative Commons Attribution 2.5 via Wikimedia Commons (Image source)

Taxonomy ID 29058

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_023701775.1].

The total length of the assembly is 356685670 bp contained within 42 scaffolds. The scaffold N50 value is 12270862, the scaffold L50 value is 13. Assembly gaps span 7091 bp. The GC% content of the assembly is 36.5%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_023701775.1.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyHaSCD2, INSDC Assembly GCA_023701775.1,
Database version113.1
Golden Path Length356,685,670
Genebuild byNCBI
Genebuild methodImport
Data sourceNanjing Agricultural University

Gene counts

Coding genes14,962
Non coding genes2,093
Small non coding genes767
Long non coding genes1,314
Misc non coding genes12
Pseudogenes24
Gene transcripts30,911