Linepithema humile (Argentine ant) Assembly and Gene Annotation
About Linepithema humile
The Argentine ant (Linepithema humile), formerly Iridomyrmex humilis, is an ant native to northern Argentina, Uruguay, Paraguay, Bolivia and southern Brazil. It is an invasive species that has been established in many Mediterranean climate areas, inadvertently introduced by humans to many places, including South Africa, New Zealand, Japan, Easter Island, Australia, Europe, Hawaii, and the continental United States.
Picture credit: Creative Commons Attribution-Share Alike 4.0 via Wikimedia Commons (Image source) Taxonomy ID 83485
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_000217595.1].
The total length of the assembly is 219500750 bp contained within 3030 scaffolds. The scaffold N50 value is 1402257, the scaffold L50 value is 40. Assembly gaps span 6229926 bp. The GC% content of the assembly is 37.5%.
Annotation
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | Lhum_UMD_V04, INSDC Assembly GCA_000217595.1, |
Database version | 113.1 |
Golden Path Length | 219,500,750 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | The Ant Genomics Consortium |
Gene counts
Coding genes | 11,610 |
Non coding genes | 1,264 |
Small non coding genes | 178 |
Long non coding genes | 1,086 |
Pseudogenes | 210 |
Gene transcripts | 24,128 |