Lucilia cuprina (Australian sheep blowfly, Lc7/37) (ASM2204524v1)

Lucilia cuprina (Australian sheep blowfly, Lc7/37) Assembly and Gene Annotation

About Lucilia cuprina

The species Lucilia cuprina, formerly named Phaenicia cuprina, is more commonly known as the Australian sheep blowfly. It belongs to the blow-fly family Calliphoridae, and while some authorities combine the blow flies (Calliphoridae) and the flesh flies (Sarcophagidae) together into the Metopiidae family, distinguishable characteristics allow for the separation. Blow flies are about the size of a house fly or a little larger, and though considered to be nuisances indoors are essential agents in the breakdown of organic matter.

Lucilia cuprina causes the condition known as 'sheep strike'. The female fly locates a sheep with an open wound in which she lays her eggs. The emerging larvae cause large lesions on the sheep, which may prove to be fatal.

(Text from Wikipedia, the free encyclopaedia.)

Picture credit (Creative Commons BY 2.0): Graham Wise

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_022045245.1].

The total length of the assembly is 409159265 bp contained within 8457 scaffolds. The scaffold N50 value is 71024062, the scaffold L50 value is 3. Assembly gaps span 1985312 bp. The GC% content of the assembly is 29.5%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_022045245.1.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v101. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

References

  1. Lucilia cuprina genome unlocks parasitic fly biology to underpin future interventions.
    Anstead CA, Korhonen PK, Young ND, Hall RS, Jex AR, Murali SC, Hughes DS, Lee SF, Perry T, Stroehlein AJ et al. 2015. Nature Communications. 6:7344.

Statistics

Summary

AssemblyASM2204524v1, INSDC Assembly GCA_022045245.1,
Database version113.1
Golden Path Length409,159,265
Genebuild byNCBI
Genebuild methodImport
Data sourceDepartment of Entomology and Plant Pathology, North Carolina State University

Gene counts

Coding genes13,927
Non coding genes1,785
Small non coding genes732
Long non coding genes1,046
Misc non coding genes7
Pseudogenes144
Gene transcripts24,672