Lytechinus pictus (Painted urchin, DCL-2020) (UCSD_Lpic_2.1)

Lytechinus pictus (Painted urchin, DCL-2020) Assembly and Gene Annotation

About Lytechinus pictus

Lytechinus pictus, commonly known as the painted urchin (Lytechinus pictus), is a sea urchin in the family Toxopneustidae. It occurs on shallow reefs in the tropical and subtropical eastern Pacific Ocean, off the coasts of California, Central America and South America as far south as Ecuador.

Picture credit: CC0 1.0 Universal Public Domain via Wikimedia Commons (Image source)

Taxonomy ID 7653

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_015342785.2].

The total length of the assembly is 999463329 bp contained within 1307 scaffolds. The scaffold N50 value is 46031485, the scaffold L50 value is 8. The GC% content of the assembly is 36.0%.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_015342785.2.

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release vGCF_015342785.2-RS_2023_03.html. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyUCSD_Lpic_2.1, INSDC Assembly GCA_015342785.2,
Database version113.1
Golden Path Length999,463,329
Genebuild byNCBI
Genebuild methodImport
Data sourceUniversity of North Carolina Wilmington

Gene counts

Coding genes24,732
Non coding genes4,353
Small non coding genes1,852
Long non coding genes2,501
Pseudogenes1,688
Gene transcripts34,096